bench/btl/libs/blitz/blitz_interface.hh

//=====================================================
// File   :  blitz_interface.hh
// Author :  L. Plagne <laurent.plagne@edf.fr)>
// Copyright (C) EDF R&D,  lun sep 30 14:23:30 CEST 2002
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//=====================================================
//
// This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
//
// This program is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
// GNU General Public License for more details.
// You should have received a copy of the GNU General Public License
// along with this program; if not, write to the Free Software
// Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
//
#ifndef BLITZ_INTERFACE_HH
#define BLITZ_INTERFACE_HH

#include <blitz/blitz.h>
#include <blitz/array.h>
#include <blitz/vector-et.h>
#include <blitz/vecwhere.h>
#include <blitz/matrix.h>
#include <vector>

BZ_USING_NAMESPACE(blitz)

template <class real>
class blitz_interface {
 public:
  typedef real real_type;

  typedef std::vector<real> stl_vector;
  typedef std::vector<stl_vector> stl_matrix;

  typedef blitz::Array<real, 2> gene_matrix;
  typedef blitz::Array<real, 1> gene_vector;
  //   typedef blitz::Matrix<real, blitz::ColumnMajor>  gene_matrix;
  //   typedef blitz::Vector<real> gene_vector;

  static inline std::string name() { return "blitz"; }

  static void free_matrix(gene_matrix& A, int N) {}

  static void free_vector(gene_vector& B) {}

  static inline void matrix_from_stl(gene_matrix& A, stl_matrix& A_stl) {
    A.resize(A_stl[0].size(), A_stl.size());
    for (int j = 0; j < A_stl.size(); j++) {
      for (int i = 0; i < A_stl[j].size(); i++) {
        A(i, j) = A_stl[j][i];
      }
    }
  }

  static inline void vector_from_stl(gene_vector& B, stl_vector& B_stl) {
    B.resize(B_stl.size());
    for (int i = 0; i < B_stl.size(); i++) {
      B(i) = B_stl[i];
    }
  }

  static inline void vector_to_stl(gene_vector& B, stl_vector& B_stl) {
    for (int i = 0; i < B_stl.size(); i++) {
      B_stl[i] = B(i);
    }
  }

  static inline void matrix_to_stl(gene_matrix& A, stl_matrix& A_stl) {
    int N = A_stl.size();
    for (int j = 0; j < N; j++) {
      A_stl[j].resize(N);
      for (int i = 0; i < N; i++) A_stl[j][i] = A(i, j);
    }
  }

  static inline void matrix_matrix_product(const gene_matrix& A, const gene_matrix& B, gene_matrix& X, int N) {
    firstIndex i;
    secondIndex j;
    thirdIndex k;
    X = sum(A(i, k) * B(k, j), k);
  }

  static inline void ata_product(const gene_matrix& A, gene_matrix& X, int N) {
    firstIndex i;
    secondIndex j;
    thirdIndex k;
    X = sum(A(k, i) * A(k, j), k);
  }

  static inline void aat_product(const gene_matrix& A, gene_matrix& X, int N) {
    firstIndex i;
    secondIndex j;
    thirdIndex k;
    X = sum(A(i, k) * A(j, k), k);
  }

  static inline void matrix_vector_product(gene_matrix& A, gene_vector& B, gene_vector& X, int N) {
    firstIndex i;
    secondIndex j;
    X = sum(A(i, j) * B(j), j);
  }

  static inline void atv_product(gene_matrix& A, gene_vector& B, gene_vector& X, int N) {
    firstIndex i;
    secondIndex j;
    X = sum(A(j, i) * B(j), j);
  }

  static inline void axpy(const real coef, const gene_vector& X, gene_vector& Y, int N) {
    firstIndex i;
    Y = Y(i) + coef * X(i);
    // Y += coef * X;
  }

  static inline void copy_matrix(const gene_matrix& source, gene_matrix& cible, int N) {
    cible = source;
    // cible.template operator=<gene_matrix>(source);
    //     for (int i=0;i<N;i++){
    //       for (int j=0;j<N;j++){
    //         cible(i,j)=source(i,j);
    //       }
    //     }
  }

  static inline void copy_vector(const gene_vector& source, gene_vector& cible, int N) {
    // cible.template operator=<gene_vector>(source);
    cible = source;
  }
};

#endif